Nagaon University facilitates flexible and inclusive higher education through its association with Krishna Kanta Handiqui State Open University (KKHSOU) and Indira Gandhi National Open University (IGNOU). The study and learner support centres operating at Nagaon University provide academic and administrative assistance to students enrolled in various undergraduate, postgraduate, diploma, and certificate programmes offered by these open universities.

The centres support learners through academic counselling, distribution of study materials, assignment-related guidance, and examination coordination, enabling students to pursue higher education alongside professional and personal commitments. Through KKHSOU and IGNOU, Nagaon University contributes significantly to the promotion of lifelong learning, accessibility, and educational outreach in the region.